Ring Puckering: Difference between revisions

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===References===
===References===
*cite the article
* Cremer, D.; Pople, J. A. General Definition of Ring Puckering Coordinates. ''J. Am. Chem. Soc.'' '''1975''', ''97 (6)'', 1354–1358. https://doi.org/10.1021/ja00839a011.

Revision as of 18:13, 12 February 2019

Navigation: Documentation / Collective Variables / RIng Puckering


Distance

Angle

Coordination

Shape

Nucleic Acids

Puckering

Special

Energy

Algebra

Collective Variables For Ring Puckering

Type Description
PUCK6Q total puckering amplitude of six-membered ring
PUCK6P puckering azimuthal angle of six-membered ring
PUCK6T puckering polar angle of six-membered ring
PUCK5Q total puckering amplitude of five-membered ring
PUCK5P puckering azimuthal angle of five-membered ring

Definition for 6-membered ring

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ring puckering parameters for six-membered ring

References