Collective Variables: Difference between revisions
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| colspan="4" style="text-align: center; background-color: #CCCCFF;" | '''Nucleic Acids''' | | colspan="4" style="text-align: center; background-color: #CCCCFF;" | '''[[Nucleic Acids]]''' | ||
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| style="width: 5em;" | '''Type''' | | style="width: 5em;" | '''Type''' | ||
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| simple base pair parameters | | simple base pair parameters | ||
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| colspan="4" style="text-align: center; background-color: #CCCCFF;" | '''[[Peptides]]''' | |||
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| style="width: 5em;" | '''Type''' | |||
| '''Description''' | |||
| style="width: 5em;" | '''Type''' | |||
| '''Description''' | |||
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| [[CV:ALPHA|ALPHA]] | |||
| content of alpha-helix structure | |||
| [[CV:PBETA|PBETA]] | |||
| content of parallel beta-sheet structure | |||
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| [[CV:ABETA|ABETA]] | |||
| content of antiparallel beta-sheet structure | |||
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| colspan="4" style="text-align: center; background-color: #CCCCFF;" | '''[[Ring Puckering]]''' | | colspan="4" style="text-align: center; background-color: #CCCCFF;" | '''[[Ring Puckering]]''' | ||
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| [[CV:DIV|DIV]] | | [[CV:DIV|DIV]] | ||
| ratio of two collective variables | | ratio of two collective variables | ||
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| [[CV:FSWITCH|FSWITCH]] | |||
| Fermi-like switch function | |||
| [[CV:RSWITCH|RSWITCH]] | |||
| rational switch function | |||
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