Pmf-integrate: Difference between revisions

Pmf-integrate (view source)

Revision as of 13:31, 18 April 2016

4,271 bytes added , 18 April 2016

no edit summary

Xstepan3

144

edits

@@ Line 1: / Line 1: @@
-hh
+Navigation: [[Documentation]] / [[Methods]] / [[Constrained Dynamics]] / [[CON:Utilities]] / [[pmf-integrate]]
+----
+{{CONUtils}}
+'''Name'''
+pmf-integrate
+'''Synopsis'''
+<span style="color: maroon;">con-integrate</span> <span style="color: blue;">[OPTIONS]</span> [--] <span style="color: purple;">input output </span>
+'''Description'''
+Numerically integrate given data by Simpson method. Program reads three numbers from input file (x coordinate, derivative, and standard deviation of derivative). As output program prints copy of input data plus integrated values and its standard error.
+'''Arguments'''
+{| style="margin-left: 2em; width: 75%;"
+|- style="vertical-align: top; background-color: #e6e6e6;"
+| <span style="color: purple;">input</span><br/>
+<span style="margin-left: 30px;">input data file or - for data taken from standard input</span>
+|- style="vertical-align: top;"
+| <span style="color: purple;">output</span><br/>
+<span style="margin-left: 30px;">output data file or - for data written to standard output</span>
+|}
+'''Options'''
+{| style="margin-left: 2em; width: 95%;"
+|- style="vertical-align: top; background-color: #e6e6e6;"
+|<span style="color: blue;">--offset REAL</span><br/><span style="margin-left: 30px;">specifies integration constant</span><br/><span style="color:purple; margin-left: 30px;"> (Default: 0)</span>
+|- style="vertical-align: top; "
+|<span style="color: blue;">-s, --skip LINES</span><br/><span style="margin-left: 30px;">number of lines skipped from the beginning of input file</span><br/><span style="color:purple; margin-left: 30px;"> (Default: 0)</span>
+|- style="vertical-align: top; background-color: #e6e6e6;"
+|<span style="color: blue;">-a, --anal LINES</span><br/><span style="margin-left: 30px;">number of LINES from input file to be analyzed</span><br/><span style="color:purple; margin-left: 30px;"> (Default: -1)</span>
+|- style="vertical-align: top; "
+|<span style="color: blue;">-p, --pad LINES</span><br/><span style="margin-left: 30px;">number of padding LINES between used records from input file</span><br/><span style="color:purple; margin-left: 30px;"> (Default: 0)</span>
+|- style="vertical-align: top; background-color: #e6e6e6;"
+|<span style="color: blue;">--nosigma</span><br/><span style="margin-left: 30px;">standard deviation of derivative is not present in input data</span>
+|- style="vertical-align: top; "
+|<span style="color: blue;">--noheader</span><br/><span style="margin-left: 30px;">do not print header to output</span>
+|- style="vertical-align: top; background-color: #e6e6e6;"
+|<span style="color: blue;">--fx FORMAT</span><br/><span style="margin-left: 30px;">output FORMAT of echoed x values</span><br/><span style="color:purple; margin-left: 30px;"> (Default: %15.7le)</span>
+|- style="vertical-align: top; "
+|<span style="color: blue;">--fy FORMAT</span><br/><span style="margin-left: 30px;">output FORMAT of echoed derivative values</span><br/><span style="color:purple; margin-left: 30px;"> (Default: %15.7le)</span>
+|- style="vertical-align: top; background-color: #e6e6e6;"
+|<span style="color: blue;">--fs FORMAT</span><br/><span style="margin-left: 30px;">output FORMAT of echoed sigma values</span><br/><span style="color:purple; margin-left: 30px;"> (Default: %14.6le)</span>
+|- style="vertical-align: top; "
+|<span style="color: blue;">--fi FORMAT</span><br/><span style="margin-left: 30px;">output FORMAT of integrated values</span><br/><span style="color:purple; margin-left: 30px;"> (Default: %15.7le)</span>
+|- style="vertical-align: top; background-color: #e6e6e6;"
+|<span style="color: blue;">--fe FORMAT</span><br/><span style="margin-left: 30px;">output FORMAT of integrated error values</span><br/><span style="color:purple; margin-left: 30px;"> (Default: %14.6le)</span>
+|- style="vertical-align: top; "
+|<span style="color: blue;">-v, --verbose</span><br/><span style="margin-left: 30px;">increase output verbosity</span>
+|- style="vertical-align: top; background-color: #e6e6e6;"
+|<span style="color: blue;">--version</span><br/><span style="margin-left: 30px;">output version information and exit</span>
+|- style="vertical-align: top; "
+|<span style="color: blue;">-h, --help</span><br/><span style="margin-left: 30px;">display this help and exit</span>
+|}