User contributions for Xstepan3

11 April 2016

• 14:3014:30, 11 April 2016 diff hist −1‎ Rst-samples ‎No edit summary
• 14:0214:02, 11 April 2016 diff hist +2,514‎ Rst-samples ‎No edit summary
• 13:5613:56, 11 April 2016 diff hist −4‎ CON:Utilities ‎No edit summary
• 13:5513:55, 11 April 2016 diff hist −8‎ CON:Utilities ‎No edit summary
• 13:5313:53, 11 April 2016 diff hist +4‎ CON:Utilities ‎No edit summary
• 13:5213:52, 11 April 2016 diff hist +230‎ CON:Utilities ‎No edit summary
• 13:4513:45, 11 April 2016 diff hist −20‎ Mtd-energy ‎No edit summary
• 13:2813:28, 11 April 2016 diff hist −4,334‎ Rst-samples ‎ Blanked the page
• 13:0513:05, 11 April 2016 diff hist −547‎ Rst-samples ‎No edit summary
• 13:0413:04, 11 April 2016 diff hist +372‎ Rst-samples ‎No edit summary
• 13:0013:00, 11 April 2016 diff hist +1‎ Rst-samples ‎No edit summary
• 12:5912:59, 11 April 2016 diff hist −31‎ Rst-samples ‎No edit summary
• 12:5812:58, 11 April 2016 diff hist −240‎ Rst-samples ‎No edit summary
• 12:5612:56, 11 April 2016 diff hist −28‎ Rst-samples ‎No edit summary
• 12:5312:53, 11 April 2016 diff hist +544‎ Rst-samples ‎No edit summary
• 12:3012:30, 11 April 2016 diff hist −256‎ Rst-samples ‎No edit summary

7 April 2016

• 14:3414:34, 7 April 2016 diff hist +248‎ Rst-samples ‎No edit summary

5 April 2016

• 16:4816:48, 5 April 2016 diff hist +2,749‎ Rst-samples ‎No edit summary
• 16:4716:47, 5 April 2016 diff hist +1,522‎ N Rst-samples ‎ Created page with "Navigation: Documentation / Methods / Metadynamics / MTD:Utilities / mtd-server ---- {{MTDUtils}} '''Name''' mtd-server '''Synopsis''' <span style="colo..."
• 14:2414:24, 5 April 2016 diff hist +1‎ Documentation ‎No edit summary
• 14:2414:24, 5 April 2016 diff hist +1‎ Documentation ‎No edit summary
• 10:5710:57, 5 April 2016 diff hist 0‎ Control file ‎No edit summary
• 10:5610:56, 5 April 2016 diff hist +4,928‎ N Mask format ‎ Created page with "Navigation: Documentation / Control file / Mask format ---- In most cases, collective variables depend on positions of certain atoms. For their specification, PMFL..." current
• 10:5510:55, 5 April 2016 diff hist +3,141‎ N Control file format ‎ Created page with "Navigation: Documentation / Control file / Control file format ---- Control files used by PMFLib are plain ASCII text files consisting from three type of entries:..." current
• 10:5510:55, 5 April 2016 diff hist +1,279‎ N Control file ‎ Created page with "Navigation: Documentation / Control file ---- Calculations of free energies by PMFLib are controled by a setup provided in the control file. This file contains general..."
• 10:5010:50, 5 April 2016 diff hist +636‎ N Various Hints ‎ Created page with "Navigation: Documentation ---- ===== What bin size should I choose for ABF? ===== The ABF method calculates the mean force in each bin and applies this force back to the s..." current
• 10:4910:49, 5 April 2016 diff hist +79‎ Documentation ‎No edit summary
• 10:4710:47, 5 April 2016 diff hist +990‎ N Utilities ‎ Created page with "Navigation: Documentation / Utilities ---- __NOEDITSECTION__ ===All utilities=== <span style="font-size:150%;">A</span> abf-accuinfo, abf-admin, [[abf-combine]..."
• 10:4610:46, 5 April 2016 diff hist +4,337‎ N Paths ‎ Created page with "Navigation: Documentation / Paths ---- __NOEDITSECTION__ Paths define subset of configuration space in which the free energy is being calculated or collective variable..."
• 10:4210:42, 5 April 2016 diff hist +897‎ N Pmf-path-reconstruct ‎ Created page with "Navigation: Documentation / Utilities / OTH:Utilities / pmf-path-reconstruct ---- '''Name''' pmf-path-reconstruct '''Synopsis''' <span style="color: maroon;..." current
• 10:4110:41, 5 April 2016 diff hist +154‎ N PDRV:Utilities ‎ Created page with "Navigation: Documentation / Methods / Path Driving / PDRV:Utilities ---- Various utilities for path management: *pmf-path-reconstruct" current
• 10:4010:40, 5 April 2016 diff hist +2,162‎ N PDRV:Paths ‎ Created page with "Navigation: Documentation / Methods / Path Driving / PDRV:Paths ---- __NOEDITSECTION__ __NOTOC__ Each path used in the path driving method is provided in a sep..." current
• 10:4010:40, 5 April 2016 diff hist +1,064‎ N PDRV:Controls ‎ Created page with "Navigation: Documentation / Methods / Path Driving / PDRV:Controls ---- __NOEDITSECTION__ __NOTOC__ The behaviour of the path driving is controlled by the setu..." current
• 10:4010:40, 5 April 2016 diff hist +242‎ N Path Driving ‎ Created page with "Navigation: Documentation / Methods / Path Driving ---- __NOEDITSECTION__ ==Contents== * PDRV:Description * PDRV:Controls * PDRV..." current
• 10:3910:39, 5 April 2016 diff hist +960‎ N MON:Collective variables ‎ Created page with "Navigation: Documentation / Methods / Collective Variable Monitoring / MON:Collective variables ---- __NOEDITSECTION__ __NOTOC__ Each collective variable used..." current
• 10:3910:39, 5 April 2016 diff hist +1,135‎ N MON:Controls ‎ Created page with "Navigation: Documentation / Methods / Collective Variable Monitoring / MON:Controls ---- __NOEDITSECTION__ __NOTOC__ The behaviour of the monitoring is control..." current
• 10:3810:38, 5 April 2016 diff hist +267‎ N Collective Variable Monitoring ‎ Created page with "Navigation: Documentation / Methods / Collective Variable Monitoring ---- __NOEDITSECTION__ ==Contents== * Collective Variable Monitoring#Description|MON:Descrip..." current
• 10:3710:37, 5 April 2016 diff hist +1,269‎ N Stm-server ‎ Created page with "Navigation: Documentation / Methods / String Method / STM:Utilities / stm-server ---- {{STMUtils}} '''Name''' stm-server '''Synopsis''' <span style="col..."
• 10:3610:36, 5 April 2016 diff hist +2,939‎ N Stm-admin ‎ Created page with "Navigation: Documentation / Methods / String Method / STM:Utilities / stm-admin ---- {{STMUtils}} '''Name''' stm-admin '''Synopsis''' <span style="color..."
• 10:3510:35, 5 April 2016 diff hist +427‎ N Template:STMUtils ‎ Created page with "__NOTOC__ <div style="float:right; border-style: solid; border-width: 1px; border-color: #aaaaaa; background-color: #f6f6f6; padding: 0px; width: 10em;"> <h1 style="margin:2px..." current
• 10:3510:35, 5 April 2016 diff hist +225‎ N STM:Utilities ‎ Created page with "Navigation: Documentation / Methods / String Method / STM:Utilities ---- {{STMUtils}} The string method is implemented and managed by following utilities: * [..." current
• 10:3310:33, 5 April 2016 diff hist +1,279‎ N STM:Collective variables ‎ Created page with "Navigation: Documentation / Methods / String Method / STM:Collective variables ---- __NOEDITSECTION__ __NOTOC__ Each collective variable used in the string met..."
• 10:3310:33, 5 April 2016 diff hist +2,740‎ N STM:Controls ‎ Created page with "Navigation: Documentation / Methods / String Method / STM:Controls ---- __NOEDITSECTION__ __NOTOC__ The behaviour of the string method is controlled by the set..." current
• 10:3210:32, 5 April 2016 diff hist +281‎ N String Method ‎ Created page with "Navigation: Documentation / Methods / String Method ---- __NOEDITSECTION__ ==Contents== * STM:Description * STM:Controls * STM:..." current

1 April 2016

• 15:2115:21, 1 April 2016 diff hist +424‎ N Template:RSTUtils ‎ Created page with "__NOTOC__ <div style="float:right; border-style: solid; border-width: 1px; border-color: #aaaaaa; background-color: #f6f6f6; padding: 0px; width: 10em;"> <h1 style="margin:2px..." current
• 15:2015:20, 1 April 2016 diff hist +252‎ N RST:Utilities ‎ Created page with "Navigation: Documentation / Methods / Restrained Dynamics / RST:Utilities ---- {{RSTUtils}} Data produced by the restrained dynamicscan be processed or analyze..." current
• 15:2015:20, 1 April 2016 diff hist +100‎ N RST:Post-processing ‎ Created page with "Navigation: Documentation / Methods / Restrained Dynamics / RST:Post-processing ----" current
• 15:1915:19, 1 April 2016 diff hist +93‎ N RST:Examples ‎ Created page with "Navigation: Documentation / Methods / Restrained Dynamics / RST:Examples ----" current
• 15:1915:19, 1 April 2016 diff hist +23‎ RST:Restraints ‎No edit summary current
• 15:1815:18, 1 April 2016 diff hist +2,453‎ N RST:Restraints ‎ Created page with "Navigation: Documentation / Methods / Restrained Dynamics / RST:Restraints ---- __NOEDITSECTION__ __NOTOC__ Each restraint used in the restrained dynamics simu..."