Rst-samples: Difference between revisions

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Navigation: [[Documentation]] / [[Methods]] / [[Metadynamics]] / [[MTD:Utilities]] / [[mtd-energy]]
Navigation: [[Documentation]] / [[Methods]] / [[Metadynamics]] / [[MTD:Utilities]] / [[mtd-energy]]
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{| style="margin-left: 2em; width: 75%;"
{| style="margin-left: 2em; width: 75%;"
|- style="vertical-align: top; background-color: \#e6e6e6;"
|- style="vertical-align: top; background-color: #e6e6e6;"
| <span style="color: purple;">input</span><br/>
| <span style="color: purple;">input</span><br/>
<span style="margin-left: 30px;">Name of file containing the metadynamics restart file. If the name is '-' then the file is read from the standard input.</span>
<span style="margin-left: 30px;">Name of file containing the metadynamics restart file. If the name is '-' then the file is read from the standard input.</span>
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<span style="margin-left: 30px;">Name of file where the resulting free energy surface will be printed. If the name is '-' then the output will be written to the standard output.</span>
<span style="margin-left: 30px;">Name of file where the resulting free energy surface will be printed. If the name is '-' then the output will be written to the standard output.</span>
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'''Options'''
'''Options'''
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{| style="margin-left: 2em; width: 95%;"
|- style="vertical-align: top; background-color: #e6e6e6;"
|- style="vertical-align: top; background-color: #e6e6e6;"
|<span style="color: blue;">Options:</span><br/><span style="margin-left: 30px;"></span><br/>
|<span style="color: blue;"></span><br/><span style="margin-left: 30px;"></span><br/>
<span style="color:purple; margin-left: 30px;"></span>
<span style="color:purple; margin-left: 30px;"></span>
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Laio, A.; Gervasio, F. Metadynamics: a method to simulate rare events and reconstruct the free energy in biophysics, chemistry and material science. ''REPORTS ON PROGRESS IN PHYSICS'' '''2008''', ''71 (12)'', doi: 10.1088/0034-4885/71/12/126601.
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