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* Kumari, M.; Kozmon, S.; Kulhánek, P.; Štěpán, J.; Tvarožka, I.; Koča, J. Exploring Reaction Pathways for O-GlcNAc Transferase Catalysis. A String Method Study. ''J. Phys. Chem. B'' '''2015''', ''119'' (12), 4371?4381. [https://doi.org/10.1021/jp511235f doi:10.1021/jp511235f].
* Kumari, M.; Kozmon, S.; Kulhánek, P.; Štěpán, J.; Tvarožka, I.; Koča, J. Exploring Reaction Pathways for O-GlcNAc Transferase Catalysis. A String Method Study. ''J. Phys. Chem. B'' '''2015''', ''119'' (12), 4371?4381. [https://doi.org/10.1021/jp511235f doi:10.1021/jp511235f].
* Ruzicka, M.; Kulhanek, P.; Radova, L.; Cechova, A.; Spackova, N.; Fajkusova, L.; Reblova, K. DNA Mutation Motifs in the Genes Associated with Inherited Diseases. ''PLoS One'' '''2017''', ''12'' (8), e0182377. [https://doi.org/10.1371/journal.pone.0182377 doi:10.1371/journal.pone.0182377].
* Stepan, J.; Kabelka, I.; Koca, J.; Kulhanek, P. Behavior of BsoBI Endonuclease in the Presence and Absence of DNA. ''J. Mol. Model.'' '''2018''', ''24'' (1), 22. [https://doi.org/10.1007/s00894-017-3557-8 doi:10.1007/s00894-017-3557-8].
* Stepan, J.; Kabelka, I.; Koca, J.; Kulhanek, P. Behavior of BsoBI Endonuclease in the Presence and Absence of DNA. ''J. Mol. Model.'' '''2018''', ''24'' (1), 22. [https://doi.org/10.1007/s00894-017-3557-8 doi:10.1007/s00894-017-3557-8].

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