Collective Variable Monitoring: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| (5 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
Navigation: [[Documentation]] / [[Methods]] / [[Collective Variable Monitoring]] | Navigation: [[Documentation]] / [[Methods]] / [[Collective Variable Monitoring]] __NOEDITSECTION__ | ||
---- | ---- | ||
=Introduction= | |||
== | The Collective Variable Monitoring (MON) method implemented in PMFLib records the values of selected collective variables during a molecular dynamics simulation. The generated time series can be used for further analysis, such as plotting the time evolution of collective variables, checking the stability of a simulation, or estimating statistical properties including autocorrelation times. This method imposes no bias or constraint on the system; it only monitors and writes the selected collective variables for subsequent processing. | ||
=Documentation= | |||
* [[MON:Controls]] | * [[MON:Controls]] | ||
* [[MON:Collective variables]] | * [[MON:Collective variables]] | ||
* [[MON:Examples]] | * [[MON:Examples]] | ||
Latest revision as of 10:20, 21 June 2026
Navigation: Documentation / Methods / Collective Variable Monitoring
Introduction
The Collective Variable Monitoring (MON) method implemented in PMFLib records the values of selected collective variables during a molecular dynamics simulation. The generated time series can be used for further analysis, such as plotting the time evolution of collective variables, checking the stability of a simulation, or estimating statistical properties including autocorrelation times. This method imposes no bias or constraint on the system; it only monitors and writes the selected collective variables for subsequent processing.